PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545040.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 248aa    MW: 27216.5 Da    PI: 9.6555
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-202170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a+++a+++++g
  XP_023545040.1 21 HFRGVRKRP-WGRYAAEIRDPCK---KSRVWLGTFDTAEEAARAYDKAAREFRG 70
                    69*******.**********854...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAPREKAVAV KANVGNVKEV HFRGVRKRPW GRYAAEIRDP CKKSRVWLGT FDTAEEAARA  60
YDKAAREFRG VKAKTNFPLP SDDLLNLNNK INNINNNQSP SQSSTVESSS REQPLMVDSS  120
PLNLNLAHGM PGLTAAGAVT FPFQRYQIPM IGEVFSRGIP PSNHVLYFDA ALRAGMIKTH  180
PHPNQRLRFD HHHEAVSDFR REYAGGGVQS DSDSSSVVDM NGQDLKPRSG GGVGGLDLDL  240
NFPPPESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-24ERF family protein