PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545045.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 259aa    MW: 29209.8 Da    PI: 10.717
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-0978128353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_023545045.1  78 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 128
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MSNLHYPVTG ALQLSFESLS SINMESLHDR ASVMQSIQSY PTSGTMHQMY PQGQPLMIKH  60
YSPISSFPRK ENTLHAAQKH RLAEQSRRNR ISGQYDTLRA ILPSIYKTDM SKLKKAFVLS  120
ETIRMVKEFK KLVSEKRATN REVGDCGIPS GADRLSLEHC DGGEGMVKAV MSCEDRPNIM  180
AELAKALKTV KVKLVRAEMV TMGGRNKFAL WMQGPKEGPG VLKRVLEAVM RRPSWIARKH  240
RSSWHSRAST AYNFNRATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.14e-23bHLH family protein