PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545047.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 233aa    MW: 26413.8 Da    PI: 10.9142
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-0952102353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_023545047.1  52 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 102
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVLLHQVMQS IQSYPTSGTM HQMYPQGQPL MIKHYSPISS FPRKENTLHA AQKHRLAEQS  60
RRNRISGQYD TLRAILPSIY KTDMSKLKKA FVLSETIRMV KEFKKLVSEK RATNREVGDC  120
GIPSGADRLS LEHCDGGEGM VKAVMSCEDR PNIMAELAKA LKTVKVKLVR AEMVTMGGRN  180
KFALWMQGPK EGPGVLKRVL EAVMRRPSWI ARKHRSSWHS RASTAYNFNR ATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.12e-23bHLH family protein