PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545106.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 188aa    MW: 20368.8 Da    PI: 6.1066
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43.1e-0961101954
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      r RR+ri ++f  L++l+P  +      K++ +++L +A++Y+k L
  XP_023545106.1  61 ARERRHRISDRFKILQSLVPGgN------KMDTVSMLDEAIHYVKFL 101
                     699*****************955......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MDYSFPASNP SSCGSSSGGD GGETRKEKMK KNGGGGGSGS GGGKRSKGVM KLSTDPQSVA  60
ARERRHRISD RFKILQSLVP GGNKMDTVSM LDEAIHYVKF LKTQIWLHQT MINFVDYDDP  120
SSSSAAATAV NCPNSGIPVG GDMNFVFPEN EVVKMEEAFL PHLDPDNIYF PSGQDQFMCS  180
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