PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545126.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 236aa MW: 26455.9 Da PI: 9.2398

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.4	5.9e-39	92	204	3	121
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 kkdrhski+T++g+RdRRvRls+e+ ++fFdLqd+LG+dk+skt++WLl+++ +aikelt+++++++++ ++ +++s + +a +++ + XP_023545126.1 92 MKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNSNNNNSNNN-----NNLYNFDS-EFEAHKTTLP 180 69***********************************************************66666222.....22222222.2344444466 PP TCP 98 kksqksaasalnlakesrakarar 121 k +k+ + lakesrak + XP_023545126.1 181 KCCKKNVGFHDVLAKESRAKNFKC 204 666777777799999*998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MFSSTNNLHL FPVQHYFVPS SSSSSSSYHQ LVPPPPPPPP PPPGPAVACP ANNALVLQDL 60 QNPFVGVGEE GRMKNEEEGQ CYSCGVNQKS RMKKDRHSKI YTAQGLRDRR VRLSIEISRK 120 FFDLQDMLGY DKASKTLDWL LNNSRKAIKE LTNSNNNNSN NNNNLYNFDS EFEAHKTTLP 180 KCCKKNVGFH DVLAKESRAK NFKCVRSHGI AAATTNTCTN TYISMVVCGF NPTFYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	4e-29	TCP family protein