PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545145.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

HD-ZIP

Protein Properties

Length: 302aa MW: 33651.6 Da PI: 7.1428

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.3	1.1e-17	82	134	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k XP_023545145.1 82 KKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWK 134 4568889*********************************************9 PP
2	HD-ZIP_I/II	126.5	1.2e-40	80	171	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlE+dy++Lk++++alk++n+ L++++++L+++l XP_023545145.1 80 EKKKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDVLKKQFEALKADNDVLQAQNTKLHAQLL 171 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MASPHHSHSF MFQSRPADHH DYAPTATASF NNIPFCPPHL YFHDGVVPLM MKRSMSFSEN 60 GCEEVNGDEG LSDDGSALGE KKKRLNLEQV KALEKSFELG NKLEPERKLQ LAKALGLQPR 120 QIAIWFQNRR ARWKTKQLER DYDVLKKQFE ALKADNDVLQ AQNTKLHAQL LALKTKDSGE 180 VAAGGSATVN LKKENERCWS SDNSCDINLE MSRTQASITS NGSSGGRGCS QPGIKDLFPS 240 AAFRSAAITQ LLQHGSSRST VDHSPVIQEE SFTQMFNGME EQQQTTAAGF WPWGSDQNSH 300 FH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	1e-81	HD-ZIP family protein