PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545185.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 211aa MW: 24230.2 Da PI: 9.883

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.7	6.1e-21	38	99	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+ps +++++++++l +++ ++V++WFqN++a+e++ XP_023545185.1 38 KCGRWNPTAEQVKVLTELFRSgLRTPSSDQIQKISHQLsfygKIESKNVFYWFQNHKARERQ 99 568***************99************************************97 PP
2	Wus_type_Homeobox	113.9	8.1e-37	38	101	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_023545185.1 38 KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKR 101 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MKNNMNMDEG ISSRFYVKPA GGGGDGGGVA GKGSMSSKCG RWNPTAEQVK VLTELFRSGL 60 RTPSSDQIQK ISHQLSFYGK IESKNVFYWF QNHKARERQK RRKVSISLDH THHHHHRQQQ 120 QQQQHFILPP CSNYFADDRS TTNKGGTMEL EPERMMKTLQ LFPLNSIDET EGDNDHKFRV 180 NGKQYEEATA FTYKIGTKMD HPPLDLRLSF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-53	WOX family protein