PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545208.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 261aa MW: 29104.2 Da PI: 5.6633

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.6	2.1e-22	119	180	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59 +Dg +WrKYGqK ++++++p+sYYrCt++ +Cp+ k+v+r +++ k+ eitY ++H++ XP_023545208.1 119 EDGRAWRKYGQKAIQNKTYPKSYYRCTHKfdqSCPAVKHVQRIEDNSKImYEITYISDHTCA 180 79************************9999*******988886269*****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MEATGYRHQR LTAEARRRII EILRRGRQSA AQLQIDLQSA AAASAGLNWL ALADEIESSF 60 AEVISLVVSS ESASCPDHSL CSDLDSGYSR RSPAVKDLGR GNKRRKLANT RTVTAATAED 120 GRAWRKYGQK AIQNKTYPKS YYRCTHKFDQ SCPAVKHVQR IEDNSKIMYE ITYISDHTCA 180 PASPTADTSS NSYNLICFSD SHNGQFTEGT DDDATKVGET TMASGVMNEI DLWAEFNDFE 240 TQYGLFGDNE DPYFFVDSFL K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	130	KRRKLANTRTVTAATAEDGRAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-25	WRKY family protein