PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545300.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 316aa MW: 35806.6 Da PI: 4.9723

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.5e-09	250	284	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp++ee+ +L+ +gL+++q+ +WF N+R ++ XP_023545300.1 250 KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRH 284 569*****************************885 PP
2	ELK	34.8	3.6e-12	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Ll+KYsgyL+sLk+EF+ XP_023545300.1 204 DLKEMLLKKYSGYLSSLKKEFL 225 6********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MDEFYRLNNP VMASYSNGVL GGEAIASTSC GDIHEALMVD DELLHLEAEP TTGLNMSDMI 60 KTQIINHPLY PKLVSAYIEC QKVGAPPQVA SLLEEIGREN HPSRSCIELG ADPQLDNFME 120 SYCEVLHQYK NELSKPFDEA AMFLTNIELE LSNLCKGSFT ATSESRSVIN DEVAKTPEEE 180 PSSYGEVETT GNHEPFSTRK TNQDLKEMLL KKYSGYLSSL KKEFLKKRKK EKLPKDARMA 240 LLEWWSTHYK WPYPTEEEKS KLSVITGLDQ KQINNWFINQ RKRHWKPPED MRFMLMDGAG 300 AGVGDGECIK GLNQAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LKKEFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	9e-73	TALE family protein