PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545386.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 335aa    MW: 35817.6 Da    PI: 9.706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-1884133255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  XP_023545386.1  84 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEDAARAYDRAAIILYG 133
                     59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MDDHSPSSSF PHPPRDHPSS SSSSPSPSPD PNSPLLPPPN PTHPPPPPLP PSPSANTTPS  60
SSPTPTNGAR KRKGKGGPDN NKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFSTAEDA  120
ARAYDRAAII LYGSRAQLNL QASSPNSSSS SHSSSSQSNS RSNNLQTLRP LLPRPAAAAA  180
AFSFSSMASS LPIMTSHQSS SNNSNSSNFL PYGVYPSPGF TLMCPNLVHQ YPPQLTQHPH  240
AFSAPSNEIP STSTVTTSIA TPSPPSTTSY HQNPNPLLVA SPQINPTPVA PPPLVSDLVV  300
GPIGPGSPAV GWPLENDEDY LPSLWDYGDP FFFDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.13e-31ERF family protein