PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545431.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 237aa    MW: 27080.8 Da    PI: 4.4685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.5e-135597754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      Er+RR+++N+++  Lr ++P+      +K++Ka+i + A+eYI++L
  XP_023545431.1 55 LSERNRRKKLNDRLLALRAVVPNI-----TKMDKASIIKDAIEYIQEL 97
                    57*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MENILDEYQY YWETNMFLQT EEFDSWGVDE AFYGSYDSSS PDGTPSSLEA SKNILSERNR  60
RKKLNDRLLA LRAVVPNITK MDKASIIKDA IEYIQELRAE EKRIEAEISD LESGKIKNRA  120
TNEDDDGILR EKRTNKNRQV PEPPPSFPIE VLDLRVNYMG EKTMVVSLTC GRRSDTIMKI  180
CQVIESLKMK IITATITIVA NKLLITLFLE EEIAEEEEVK VKIEAAIAAI SDPQNPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-59bHLH family protein