PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545717.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WOX
Protein Properties Length: 252aa    MW: 28734.2 Da    PI: 9.9667
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.6e-21118177357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eq+ +Le l+ +  r+p+a+++e+++++l    +++ ++V++WFqN++a+e++
  XP_023545717.1 118 TRWNPTQEQIGILEMLYSRgMRTPNAQQIEHITAQLgnygKIEGKNVFYWFQNHKARERQ 177
                     7*****************99**************************************97 PP
2Wus_type_Homeobox116.21.6e-37118179465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq
     XP_023545717.1 118 TRWNPTQEQIGILEMLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQ 179
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MPFFTMGSSM KVHQFARGFW DEPSLSLGCK RLRPLAPKLQ QHQQQHQQQH QQQHPSSSSS  60
SDHNTTTTTL TTLDLKTFIR PDCGPRKLGS SHDHNKGSSS SSSSSSPQTA VETHPGGTRW  120
NPTQEQIGIL EMLYSRGMRT PNAQQIEHIT AQLGNYGKIE GKNVFYWFQN HKARERQKQK  180
RNSLGLPHSP RTPPPPILPT FHPSFPGEED SPYKKKCLYW GFECFVQHNG ILCKKEDGDR  240
TLDLFPLHPE RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.11e-59WOX family protein