PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545787.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 328aa    MW: 36940.9 Da    PI: 6.2572
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-1959108255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa+a++ a+++++g
  XP_023545787.1  59 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAARAYDCAARSMRG 108
                     59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEDSFRRVNN NTNNTNTTNN PFLDYQMKST ATTTTAAPTS ATGLKRTLRD HNSTTATMRY  60
RGVRRRPWGR YAAEIRDPQS KERRWLGTFD TAEEAARAYD CAARSMRGLK ARTNFVYPSS  120
PPPHSLWDEY VIPRFNFPKQ SHPGLPRVNA SNWPMFSSPS RGAEFVWSGA QRMNTASPTL  180
DMLLLRDFLN FPSANASNPK PPSLINNTLA TKIAASPPDH SVQQQNYYSS QFLPKDSPDS  240
GLLEEIIHGF FPKSDYSKAN SDDQSDPVAD ELKNQHSPSF TTDLDLLDYP DCSIQAEFNE  300
GGERVFGNPE NVMVDDIFQC PESVYFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-16ERF family protein