PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545929.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 522aa MW: 55098.5 Da PI: 8.8446

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	94	138	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_023545929.1 94 RKPWSEAEDLELMAAVKKCGEGNWANIIRgdFLS-DRTASQLSQRW 138 789**********************995521344.66666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV 60 PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI 120 IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG 180 SLKAARISGS ASTNKIGNGS SLAVSATSEQ VQDKLQQSPT HTKPSPIGSS SLTAKAQVTT 240 SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNAIHITA KIPASTKTPT 300 PGRGSNHLEA HPSIKTTTLS NTLAVMPSLS RGVPVKTTSL QTATLSSVPT DQNIAVASVT 360 AATDPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRKS ISERVLDEKP ADLGPALKRQ 420 TTETSNCSSS SQNTPTADGY IKVETCNQVE ERQNSNTSAV PVSSDQQEIM NQSQVERSKP 480 QDMDIDSDGK DTPITKADGC SENSGHKEAV NDILEGNTAV KS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MENYFFQVFI SSGSSSDLNV PSSSTIEAPL TISLPRSYRD GVQFENVDPA CSIKGASITV  60
PVSVQRQPVL TPPSVEGLNA NGSTYGNNAS RRKRKPWSEA EDLELMAAVK KCGEGNWANI  120
IRGDFLSDRT ASQLSQRWAI IKKKHGNLTV GANTAGTHLS EVQLAARHAM SLALDRHVVG  180
SLKAARISGS ASTNKIGNGS SLAVSATSEQ VQDKLQQSPT HTKPSPIGSS SLTAKAQVTT  240
SKKMIPKSSF DSDCIVRAAA VAAGARIASP ADAASLLKAA QSKNAIHITA KIPASTKTPT  300
PGRGSNHLEA HPSIKTTTLS NTLAVMPSLS RGVPVKTTSL QTATLSSVPT DQNIAVASVT  360
AATDPLSEKE IKTVEDVRGR GLGGVQTTFQ KNDHCLSRKS ISERVLDEKP ADLGPALKRQ  420
TTETSNCSSS SQNTPTADGY IKVETCNQVE ERQNSNTSAV PVSSDQQEIM NQSQVERSKP  480
QDMDIDSDGK DTPITKADGC SENSGHKEAV NDILEGNTAV KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-38	MYB_related family protein