PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546261.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 153aa MW: 17961.9 Da PI: 4.9508

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.4	1e-31	93	151	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver++edpk+v++tYeg H+he XP_023546261.1 93 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHE 151 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MSYNSNQHLV MSENDLPEQP GFEFTDWMFD RWLDENSPPL VDSAMYPVYQ SGEIEEFVGS 60 TIQQGEPSSR DSGREREVRE RFAFKTKSEV EVLDDGFKWR KYGKKMVKNS PNPRNYYKCS 120 VEGCPVKKRV ERDREDPKYV ITTYEGVHTH ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	4e-44	WRKY family protein