PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546334.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 220aa    MW: 24418.6 Da    PI: 9.783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08132172954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++++P       +K++ a++L +A++Y+k L
  XP_023546334.1 132 ARHRRERISERIRILQRIVPGG-----TKMDTASMLDEAIHYVKFL 172
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDVLTQMENF SEFFEFTELP SWPFSFGSSN IGATSHRFQN PTPPILPSYA LSSTASMNNA  60
THPLAPPCPP PHSPAATPNS HTKQQQQDSM GAMREMIYRI AAMQPIQIDP EAVKPPKRRN  120
VKISKDPQSV AARHRRERIS ERIRILQRIV PGGTKMDTAS MLDEAIHYVK FLKSQVQSLQ  180
IAANNRPSSA FGFPAAMSAG GSNYKQFQFA QTGHEHVEDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.15e-41bHLH family protein