PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546357.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 241aa MW: 26589.4 Da PI: 8.767

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	52.3	1.1e-16	126	165	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + k+C+C+kskClk+YC+Cfaag +Cse+C+C++C+Nk + XP_023546357.1 126 DAKRCSCTKSKCLKLYCDCFAAGMYCSENCSCQGCFNKPK 165 5799*********************************987 PP
2	TCR	24.9	4.1e-08	212	233	1	22
TCR 1 kekkgCnCkkskClkkYCeCfa 22 ++kkgC+C ks C k+YCeCf+ XP_023546357.1 212 RHKKGCKCIKSMCSKQYCECFQ 233 589******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MNFEATFNNR VPAAANSSHL VRTPLRPTSV GNPLLQAPKP SGIGLHPNSV ILEACNAVVG 60 RTNKAISLPN SFILEPCNAA VKAETSETPH DTRDSDFNQS PNLEKISKVI PRRKRKKSSV 120 NNNGDDAKRC SCTKSKCLKL YCDCFAAGMY CSENCSCQGC FNKPKNLRTV LETRHQIETR 180 DPLAFAPTVI EDRNEIPVNN ENGSLSTPSL ARHKKGCKCI KSMCSKQYCE CFQVYYPSLC 240 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	117	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	2e-43	CPP family protein