PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546365.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 281aa    MW: 31203.9 Da    PI: 7.235
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-18108157255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  XP_023546365.1 108 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPSPEMAARAHDVAALSIKG 157
                     69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGYFSAVAPG TRTLARGPDS PSVDEPREGT LRFSGHWILT NVYITQTDIL ACGTRTNKFQ  60
NPKSRLPFYL TLSQKMSINE NATTTCSSPE PNKKPKRIRD TEDSNHPLYR GVRMRNWGKW  120
VSEIREPRKK SRIWLGTFPS PEMAARAHDV AALSIKGKAA ILNFPDLVHL LPRPVSLAPR  180
DVQAAAAKAA HMHHFSSTHT NNNNSSSSSS SSDATDELTE IVQLPTLGTS YDGGFGGEFV  240
FFDSGQELES GCWMYAPPWV QSLGDCDNDD YGKFEGLLWD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-54ERF family protein