PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546470.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NF-YB

Protein Properties

Length: 138aa MW: 15795.5 Da PI: 4.764

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	139.7	7.8e-44	8	98	5	95
NF-YB 5 drflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 + lPianv+r+mkk+lP++akisk+ak t+qec++efisfvtsea++kc++++r+t+ngdd++wa++++G+++y+e+ +yl kyr++e+ XP_023546470.1 8 ELQLPIANVGRLMKKILPQKAKISKEAKATMQECATEFISFVTSEAAEKCHKDNRRTLNGDDICWAFGSFGLDNYAEASAKYLLKYRDVER 98 5679*************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence
MGENNGDELQ LPIANVGRLM KKILPQKAKI SKEAKATMQE CATEFISFVT SEAAEKCHKD 60 NRRTLNGDDI CWAFGSFGLD NYAEASAKYL LKYRDVERIN AQFKTNIAPE QQRHDQDQEQ 120 KQEQEQELEF NHGETSEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	2e-46	NF-YB family protein