PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546510.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 333aa MW: 36384.2 Da PI: 5.883

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.1	4.9e-16	51	100	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq XP_023546510.1 51 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 100 899***********************9....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MRTGKSNQED EEYEDDEMVA KREGPSSTSN ANSSIGNSKD AKNNDRANAI RSKHSVTEQR 60 RRSKINERFQ ILRDLIPHSD QKRDTASFLL EVIEYVQYLQ EKVQKYEGSY QNWSGEPTKL 120 IPWRNSHWRM QTFVGHPQSV KNGSASGPTF SGKFDDNNIS ISPAMLASSQ NPLDSHSGRD 180 VLQDADITNK VPLPMSLEGN IHASIRSDGV LDQSLQIPIS GGQATECPIA NNASSQPEEM 240 AIEGGTISIS SLYSEGLLNS LTQALQNTGL DLSQASVSIQ VDLGKRANKG LPFGMPIFKE 300 TGNPSSSGHP AMAHVGDLGS GDDSEQVKKR LRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-112	bHLH family protein