PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546788.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 243aa    MW: 26404.3 Da    PI: 4.6587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1757106255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+++Aa+a++ a++ ++g
  XP_023546788.1  57 IYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPDMAARAHDVAALTIKG 106
                     69****998.**********854...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSNATVPESD SGGSNSSTST SSSSFSTSCS ISSPTKKAGV CRPKRAREIT TNSRHPIYRG  60
VRMRAWGKWV SEIREPKKKS RIWLGTFATP DMAARAHDVA ALTIKGNSAI LNFPELAASL  120
PRPASSSPRD VQSAAALAAS MQLPNAPPPP PPPPPPSSPP FTSSSELDES TPEELSEIVV  180
LPSLGTSYEE SSESVTELVF DEWQYGLWDQ NQSSKEEEEE AYEFFIDQMA MAEKSFQALP  240
FSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-38ERF family protein