PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546795.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 432aa    MW: 46642.5 Da    PI: 7.1281
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.86.1e-063203581154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_023546795.1 320 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 358
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MAEEFQSTGN WWDASRSRYE AGISPSSSAI TTFVDHPDSG AGAGDPNLHI MGLGLDWNQP  60
LFRGGGEKAA ESSFRSMLQP DNMNLNMQET GQHHQHQQQQ IQWMRSEKLY SGESPATEFK  120
PINRGFSLDH HNQPPPQFSP SHYSTGDSTI TSFPIDTAAA ALYGNSTTLL QGLLAGGGSE  180
QQQVSGAGMN FPYNTHFGMN SNELMAAASW SNSKVPPFLR NSPPKGAAPT PAQSQLQFSN  240
NTAFWNASDM KDARASYIPA SYNAAALAGD KSKSRSEGGK KSGNDQNQQQ TGGGAGGGGV  300
GGAVKRPRNE TAPGLPAFKV RKEKMGDRIT ALQQLVSPFG KTDTASVLSE AIEYIKFLHE  360
QVSVLSTPYL KSGGAVQQQQ QQKWCEKRKE GEGKEEDLRS RGLCLVPVSS TFPVTHETTV  420
DFWTPSFGGT FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-61bHLH family protein