PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546818.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 229aa    MW: 25178.2 Da    PI: 9.8441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-19553153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  XP_023546818.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAVLM 53
                    59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAPSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDQAA VLMSGRNAKT  60
NFPMSETAAP ELEKLNNITT PSSTKGLSEI LHAKLRKCSK APSPSMTCLR LDTENSHIGV  120
WQKRAGQRSD SSWVMTVHLG KENSSSSSSS SSSTAAASGG NDDGGRLWNS KKSGGASMAG  180
GGPHMRNLQM DEEERIALQM IEELLSRNYG NPSEIQVQDH HEEAKLSPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-61ERF family protein