PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546872.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 243aa    MW: 27049.9 Da    PI: 8.8798
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000137193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    +kCp C+k+Fs+   L  H  +H
  XP_023546872.1 71 FKCPLCDKVFSSYQALGGHKTSH 93
                    89**********99998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MPLQALNSPF HFHDVPFLHP LKPWAKRKRS RRPPLHASPS EEEYLALCLI MLARGDPRSL  60
LEPAVATKSA FKCPLCDKVF SSYQALGGHK TSHRKPAACD DQCMSISSAT STISNSGGRA  120
HVRNVCHKSL PTGQALGRHK RCYYEDGADA TANRQSYNGM TLTSSEEVGS THIVSHSHRN  180
FDLNIPALPI LLPKPSFPGD EEVESPLPMK KPRFLWLPEP EISLNLDDPF PDWGRGIRIK  240
IQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-51C2H2 family protein