PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546902.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 255aa    MW: 27878.1 Da    PI: 6.7958
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-1886135255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  +Aa a+++a+++l+g
  XP_023546902.1  86 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHDAAMAYDNAARRLYG 135
                     69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDTIYSILLA KYHPHPSAGH VSSSSHFLAL TPILLYSPSI HIPPAISSSS MLKSSKQVKR  60
SPSASHATSR KGCMRGKGGP ENASCTYKGV RQRTWGKWVA EIREPNRGAR LWLGTFDTSH  120
DAAMAYDNAA RRLYGSEAKL NLPHLSPNLQ HHNHPLLLPV SVSSSSDSAA ATVEDVGSIS  180
SAPHDNSSSR MRFGEEEEEE IGGLWRSMSI SLDDSIWAEA AMSLDFPVVE DRDRQGVFAA  240
DFVDSNGWDT LQWCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.15e-43ERF family protein