PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546949.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 241aa    MW: 27004.3 Da    PI: 8.3348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.95e-155399354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r+h+e+ErrRR+riNs +++Lr+llP+      +K +Ka+ L ++v ++k+L
  XP_023546949.1 53 RSHKEAERRRRQRINSHLSTLRTLLPNT-----TKTDKASLLAEVVSHVKEL 99
                    78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLPFQSHYEF QSSWLSYRDG DHFKRSMSTA GCSIVGNAAD SSKDEKKSTE ASRSHKEAER  60
RRRQRINSHL STLRTLLPNT TKTDKASLLA EVVSHVKELR RRATEVAHRS ADQCDGDGGK  120
VPWAFPSEED EATLCYCDNE NRLMRATVCC DERSGLNRDL IQAIRSVHAR VVRAEMMTLG  180
GRTKNVVVLE WSDGGDGGGR EEAFVGLRRA LKAVVENQAQ NLSGHKRARA CCPIEDPFYM  240
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.14e-35bHLH family protein