PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547197.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 417aa MW: 47369.2 Da PI: 7.9396

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.2	9e-26	160	225	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_023547197.1 160 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVL---KV--QKRRIYDITNVLEGIGLIEKTTTNHIRWKG 225 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MSNAVEDLIL RHRHRHSDFR FHLLQSHSHH RDMSSSSASS SSSSSAPALP PLCLLQCHRP 60 FPPSDQSNAC NCRHAPGAHS TVATLDLKRT YGINDSEALA CGRVVASEQR MRSNDSLCKP 120 VSSANEKQNK KLKLQKNSKS RTQKSVDEPI DDPNLSTNGR YDSSLGFLTK KFIRLVQEAE 180 DGTLDLNKTA DVLKVQKRRI YDITNVLEGI GLIEKTTTNH IRWKGCERRG PQELNDQVGK 240 LKAEVKSLYA DEHRLDELIR MKQELLRNLE ENANHRKNLF ITEEDILRVP SFKNQTLIAV 300 QAPQASCIEV PDPDEEACFS ERQCRLIIKS TTGPIDLYLL RTAKQGLEEN SSKQAKLSSS 360 VQQRNPNIHT NNICSPFHEF HGMQRILPLY NNIDDDYWFQ SNSQVSITHL WGEEHNF

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MSNAVEDLIL RHRHRHSDFR FHLLQSHSHH RDMSSSSASS SSSSSAPALP PLCLLQCHRP  60
FPPSDQSNAC NCRHAPGAHS TVATLDLKRT YGINDSEALA CGRVVASEQR MRSNDSLCKP  120
VSSANEKQNK KLKLQKNSKS RTQKSVDEPI DDPNLSTNGR YDSSLGFLTK KFIRLVQEAE  180
DGTLDLNKTA DVLKVQKRRI YDITNVLEGI GLIEKTTTNH IRWKGCERRG PQELNDQVGK  240
LKAEVKSLYA DEHRLDELIR MKQELLRNLE ENANHRKNLF ITEEDILRVP SFKNQTLIAV  300
QAPQASCIEV PDPDEEACFS ERQCRLIIKS TTGPIDLYLL RTAKQGLEEN SSKQAKLSSS  360
VQQRNPNIHT NNICSPFHEF HGMQRILPLY NNIDDDYWFQ SNSQVSITHL WGEEHNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	199	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	1e-86	E2F/DP family protein