PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547217.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 201aa    MW: 22437.3 Da    PI: 4.4242
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-192272155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+WvAeIr p++   r r++lg+++++e+Aa+a +aa  +l+g
  XP_023547217.1 22 TKYKGVRRRK-WGKWVAEIRLPNS---RDRIWLGSYDSPEKAARAFDAALFCLRG 72
                    69*****998.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MNNNNNPPEL SQSSAASAAG DTKYKGVRRR KWGKWVAEIR LPNSRDRIWL GSYDSPEKAA  60
RAFDAALFCL RGRQAKFNFP NQPLPDILDA HSLTAHEIQQ LAAKFANDYN QHSSSSADQN  120
NAAVDRLQAP PATSDQNIDW SFLDNLDAVD YTPDTSNLFP LYNDDFDNIL TSDFYQSPND  180
HYDDEDGAAA AAAGQSFLWN F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-49ERF family protein