PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547243.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YC
Protein Properties Length: 140aa    MW: 15717.1 Da    PI: 9.1988
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC54.23.1e-1711911897
           NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivp 97
                    + e+P+ rikki+k d+d+ ++ +ea  l+s a elf+  l+ +s   a e+kr+t+k   i  av+r   i dfl+d  p
  XP_023547243.1 11 RPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAAEKKRKTVKLEHIRIAVKRHqSISDFLLDSLP 91
                    568**********************************9999*************************9862588*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MAEKESGEAI RPEFPMGRIK KIMKLDKDIG KVNSEALFLV SCATELFLEL LAEKSSEVAA  60
EKKRKTVKLE HIRIAVKRHQ SISDFLLDSL PLPSQPSDAP AKDENRTRVV VDKVAPEGTR  120
RIDDFFRRPA KTASAEINET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-40NF-YC family protein