PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547375.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 127aa    MW: 14199.7 Da    PI: 7.605
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-191667256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrd s    + +r++lg+f taeeAa+a+++a+  ++g+
  XP_023547375.1 16 RYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFNTAEEAARAYDRAAYVMRGH 67
                    6********.**********432...25*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MDEEPRSGTD QGGEVRYRGV RRRPWGKFAA EIRDSSRHGA RVWLGTFNTA EEAARAYDRA  60
AYVMRGHLAV LNFPDEYPSL GGSSSGSSLS APASRRQGSG GRHVIELECL DDKVLEELLE  120
YEEKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-19ERF family protein