PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547426.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 424aa    MW: 46875.3 Da    PI: 9.5346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-18223272356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ta eAa a++ a+  l+ge
  XP_023547426.1 223 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAVEAAVAYDTAAYILRGE 272
                     8******9.**********955...5************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MADQFPLLEE QKNIIQKDFS SSSLQELVSG SCFYGDPSLW EPIARASRSE NGGSKGNDQS  60
KSPSSSSSSP SSSCSSSFRM FSRGKTEISG GNLIESNVQA DGERFIPLNF LESFPKQESE  120
SFSSSPLFQS RTDSTNLTLF LQEPTIVDPY PFQIQAQNGF QWLKSHQIQN QADAIAATAS  180
RNYSDFWLGA TKTQPMKQIG RKQGNHKTET SAKATASAVG KLFRGVRQRH WGKWVAEIRL  240
PRNRTRVWLG TFDTAVEAAV AYDTAAYILR GEFAHLNFPD QKHRLKSNSL NRTTAALLEA  300
KLQAITQGNS GRKKTTTATT ATKSAIDPSS ISEKRPLQGD SKVLNLNQNP VSFSPENMSG  360
SGGNNGGGSE TGELKRNQDG ILEIEQHVQL SRMPSLDMDM IWDALVFEAH WLIFQIFVFT  420
RRSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-42ERF family protein