PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547496.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 520aa MW: 57181.4 Da PI: 5.5131

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4e-14	307	353	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr+l+P++ +K + a+i+ A++YIk+L XP_023547496.1 307 TKHFATERQRRVQLNDKYKALRSLVPSP-----TKTDRASIVGDAINYIKEL 353 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MYEETACSDP NSMSAEPTPP VVPDASQNGF PQTMAHIPSL PSFPPPPPPP LIVGGGQDTH 60 ANFDDNNLNL SMDEISYHHH HHHRSGGGDA MELEFQQQGV GFDNCNMNPS FGQEVSSDSN 120 RMVCLDQSAW VGSQIQEMGF NHHLIQSQDH QFSDSAMAAA YTQAPDLLNF FNMPAARCSN 180 NSSISFSNNT ISNLHSSAMG GFLADLPAGD GSNPSSTSLS ILYDPLFHLN LPPQPPLFRE 240 LFHSLPHGYG LPTASSRGRG GSLFPEGEIM EREGTAGVYE DGDGSGVLEF SRDMADCIGK 300 GRDGKMTKHF ATERQRRVQL NDKYKALRSL VPSPTKTDRA SIVGDAINYI KELLREVKEL 360 KLLVEKKRCS RERSKRHRTA EEDGGAWDVE SSNAKTGAVG DGGEDQSYNL RSSWLQRKTK 420 DTEVDVRIVD DEVTIKLVQR KLNCLLLVSK LLDDLQLDLH HVAGGHIGDY YSFLFNTKIY 480 EGSSVYASAI ANKVMEAVDR QYNSTNNTAN TSITPHTNTY

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MYEETACSDP NSMSAEPTPP VVPDASQNGF PQTMAHIPSL PSFPPPPPPP LIVGGGQDTH  60
ANFDDNNLNL SMDEISYHHH HHHRSGGGDA MELEFQQQGV GFDNCNMNPS FGQEVSSDSN  120
RMVCLDQSAW VGSQIQEMGF NHHLIQSQDH QFSDSAMAAA YTQAPDLLNF FNMPAARCSN  180
NSSISFSNNT ISNLHSSAMG GFLADLPAGD GSNPSSTSLS ILYDPLFHLN LPPQPPLFRE  240
LFHSLPHGYG LPTASSRGRG GSLFPEGEIM EREGTAGVYE DGDGSGVLEF SRDMADCIGK  300
GRDGKMTKHF ATERQRRVQL NDKYKALRSL VPSPTKTDRA SIVGDAINYI KELLREVKEL  360
KLLVEKKRCS RERSKRHRTA EEDGGAWDVE SSNAKTGAVG DGGEDQSYNL RSSWLQRKTK  420
DTEVDVRIVD DEVTIKLVQR KLNCLLLVSK LLDDLQLDLH HVAGGHIGDY YSFLFNTKIY  480
EGSSVYASAI ANKVMEAVDR QYNSTNNTAN TSITPHTNTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	9e-55	bHLH family protein