PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547555.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family FAR1
Protein Properties Length: 225aa    MW: 25680.3 Da    PI: 9.4275
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.18.4e-3056142289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+gkw vtk++++HnH+l
  XP_023547555.1  56 FYDAYASRLGFIIRVDAFRRSMRDGSVVWRRLVCNKEGFRKFRPKR-SENRKPRAITREGCKAMVVVKKEKSGKWIVTKFVKDHNHPL 142
                     9*******************************************99.9**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDGIPTAIED GDVVENPSGK PLARIVSEAE AIATNISDTE PYVGMEFESE ESAKVFYDAY  60
ASRLGFIIRV DAFRRSMRDG SVVWRRLVCN KEGFRKFRPK RSENRKPRAI TREGCKAMVV  120
VKKEKSGKWI VTKFVKDHNH PLIVTPASAR RNVLLSHTRD EKDAKIRELT AELQLERKRC  180
AAYQEQLAMI LRDMEEHSNH LARNIDDIVQ SVKDIESKSN TFSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.17e-92FAR1 family protein