PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547901.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 227aa    MW: 25393.1 Da    PI: 4.8549
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-1988138255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng  +r++lg+f++ae Aa a+++a+ +++g
  XP_023547901.1  88 SYRGVRRRP-WGKFAAEIRDSTRNG--ARVWLGTFDSAEAAALAYDQAAFSMRG 138
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MNSSFFHSQN ADFSPESSFG SFESLQWEGF QINDDSLPFN ENDSGEMLLH SLISEAAGYP  60
PEISLRQAPI KDEEVDSLGE EEPHKRKSYR GVRRRPWGKF AAEIRDSTRN GARVWLGTFD  120
SAEAAALAYD QAAFSMRGSA AVLNFPVERV QESLKEMEMI NSSENGGDGG SPVVALKRKH  180
SMRKKFTRRK SKERDGSGKI VNNVVVLEDL GPDYLEELLE SSENLRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-55ERF family protein