PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547954.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 293aa    MW: 32893.1 Da    PI: 8.4933
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.8e-06126145120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++Cp C+k F+r  nL+ H+
  XP_023547954.1 126 FSCPLCSKAFNRYNNLQMHM 145
                     89*****************9 PP
2zf-C2H214.50.0001210232123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +C+k F  k + ++H +++
  XP_023547954.1 210 FTCRKCTKAFAVKGDWRTHEKNC 232
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MTDPNHSNSF NFIPLPSSPP SNSGFSQCRH RPPPPPPPQA LPLLNTFSAE TTDHPSSSTS  60
YEHDSPPLAL DFSLSCPSSN YSRSISPDPT GKTLDGDISD HPLPISGKGQ FWIPTPSQIL  120
IGPTQFSCPL CSKAFNRYNN LQMHMWGHGS QYRKGPESLK GTQPTAMLKL PCYCCAPGCK  180
HNIDNPRSRP LKDFRTLQTH YKRKHGIKPF TCRKCTKAFA VKGDWRTHEK NCGKIWYCFC  240
GSDFKHKRSL KDHIKAFGRG HGALGLDYFD DDNEPGSELE HEQHEPQLLF HLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-112C2H2 family protein