PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548151.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MIKC_MADS

Protein Properties

Length: 267aa MW: 30322.5 Da PI: 10.8439

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.3	3e-31	31	80	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_023548151.1 31 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 80 79***********************************************8 PP
2	K-box	105.3	7.5e-35	101	195	6	100
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ea+++ ++qe+akL+++i n+q+ +RhllGe+++sLs+k+L++L+ +Lek++++iRs+Knell+++ie++ k+e el+++n+ +r+k++e XP_023548151.1 101 AGSVSEANTQFYEQESAKLRAQIGNMQNLNRHLLGESIGSLSVKDLKSLQVKLEKGITRIRSRKNELLFAEIEYMHKREIELHNTNQLIRAKIAE 195 55699***************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MGYPDEMQKQ KQAGEEQSQR RRSGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL 60 CDAEVALIVF STRGRLYEYA NNSVRATISR YKKACSDPLS AGSVSEANTQ FYEQESAKLR 120 AQIGNMQNLN RHLLGESIGS LSVKDLKSLQ VKLEKGITRI RSRKNELLFA EIEYMHKREI 180 ELHNTNQLIR AKIAETERRQ QNRSGNNSIG ARGGGRNRST TASDWREKLQ RKKPSNFLHT 240 PFQTLNLGFF SSSIAIPASL SLSLQVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	6e-99	MIKC_MADS family protein