PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548217.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 389aa    MW: 43047.4 Da    PI: 4.6869
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19114163255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  XP_023548217.1 114 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 163
                     69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MCGGALISGF IPTTHSRRVT GEHLWPNLKK PGFGNQLSKP VKSDIIDIDD DFETDFQHFK  60
DDSDLEFDVE ELVDVKSFAF SAGGSPAVPS ARASKSVEFS GQAEKSAKRK RKNQYRGIRQ  120
RPWGKWAAEI RDPRKGVRVW LGTFNTAEEA ARAYDAEARR IRGKKAKVNF PNEAPRTSGK  180
RSSKTNLQEP VVKTSLAKTQ SDQIQNNGFV NNSDEDYYST VGFLDEKPLT NQLVNMNSFP  240
ANTDVAIKTS PPSSDVAPMY FNSDQGSNSF EYSDFGWGEQ GAKTPEISSF LSAAMENEDS  300
YFVEDASPSK KVKYSPETME VSQGSGKTLS EELSSFESEM KYFQMPYLDG SWDASMDAFL  360
AGETGNQDGV NSVDLWSFDD FSGMVGSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.34e-78ERF family protein