PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548375.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 250aa MW: 28601.3 Da PI: 9.5144

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv +yL++kv++ +l++ ++i++v+++k++PwdLp + e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk++l++ XP_023548375.1 14 LPPGFRFHPTDEELVLQYLNRKVHSCPLPA-SIIPDVEVCKADPWDLPGN---MEQERYFFSTREAKYPNGNRSNRATASGYWKATGIDKQILTS 104 79**************************.89***********54...46799******************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kktLvfy+g+ p+g++tdW+mheyrl XP_023548375.1 105 nGNQMVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 56677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MEKLNFLKNG VLRLPPGFRF HPTDEELVLQ YLNRKVHSCP LPASIIPDVE VCKADPWDLP 60 GNMEQERYFF STREAKYPNG NRSNRATASG YWKATGIDKQ ILTSNGNQMV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLAS PPTVCFNASQ EKTPFQRSGV GPMENWVLCR IFLKKRNGHQ 180 SEEEKNRKAR LGKPVFYDFM RKERGETDLN LAPSSSSSGS SGITEISNNE LDDHEESSSC 240 NSFPYFRRKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-105	NAC family protein