PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548439.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 223aa MW: 24641.6 Da PI: 9.7131

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00016	121	159	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +++ + +K + a++L +A+ YI+ Lq XP_023548439.1 121 RKEKLVDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 159 6677778899999999887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MGGNPNWWTT SLAEQPQTWS QFVIGEEHRV FNQTQMTHYH PTKLENFQHQ IFNNNPNFAH 60 FSCNTNNPHH GSNRVVSGGG SGAPDPDRSL ESNRSAVVGG GACKKARVHP PSSTQPPLKV 120 RKEKLVDRIT ALHQIVSPFG KTDTASVLSE AIGYIRFLQG QIEALSYPYQ RSAPKELTNS 180 QPLGDERKRQ EKPLKELRSR GLCLVPLSCT HLVGAGTTYG TGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	2e-41	bHLH family protein