PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548449.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 166aa    MW: 18076.6 Da    PI: 10.6657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.9e-2155103355
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_023548449.1  55 YRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 103
                     9*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MINNPPIPSL HDAVSEPQLD GIAAVVGWKV LLGDIVPASA TGLKTAAEAT GQRSYRGVRK  60
RPWGRWSAEI RDRIGRCRHW LGTFDTAEEA ARAYDAAARR LRGSKAKTNF EMPLIVPVES  120
TSSLPISSKQ NRNGNKLKKN GRKCSVVTSA AHLFSPGLEF DLINAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-28ERF family protein