PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548450.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 230aa    MW: 25159.1 Da    PI: 7.0086
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000137092123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ Fs++  L  H++ H
  XP_023548450.1 70 FSCNFCPREFSSSQALGGHQNAH 92
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDSPPEIKDP SDSKDISPGL VSLDPSLSNK DLGGSLMPEE LNLIDFFSAD NLPNDTSHEG  60
KEAAAKPRVF SCNFCPREFS SSQALGGHQN AHNRKRKMAQ TGHKLVTNST DCKQSSVSSL  120
PFQGFNRSLG IQMHSMIHKP FSHAPVFGSF RSFESKVWDR QPLYTQVASG IWPLSENYQS  180
GASPVLPSSS GAAGFDGGWR LSSNSDTLLD SKRPHNELHK LDCLDLSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.12e-26C2H2 family protein