PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548453.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 293aa    MW: 32444.6 Da    PI: 10.5536
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.00069235254323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk+F r++ +++H++++
  XP_023548453.1 235 CSLCGKTF-RPEKMHSHMKSC 254
                     ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEGDNGGDVR RVDIIYFLGR MGHVEQPHLI RVHHLAAAGC GVYLRGMKWV SFKFIPXKGA  60
LMEGDNGGDV RRVDIIYFLG RMGHVEQPHL IRVHHLAAAG CGVYLRGNTQ PAFTKSKSYS  120
TGASTSNMLR QWITCRAVDA NDAVLINNLS PKASPNPPPL EKSINAAVFC RDDDFGASAR  180
VPRNSWDGNL QIRRHYSHPS FRKSFDHSRK KRQKESGRRK AADAPTYKPM AGPNCSLCGK  240
TFRPEKMHSH MKSCRGLRSL TKTASTSNKT TSSNSTTTPT SDKDSASTYL LTH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209220RKKRQKESGRRK