PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548519.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 250aa    MW: 28622.7 Da    PI: 10.556
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.7e-0696143254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  h ++Er RR+r ++++    +llPk      +K++K +i++ A + I++L
  XP_023548519.1  96 CHRHMMNERTRREREKQSYLGVHSLLPKK-----TKNDKNSIVQAAARTIQEL 143
                     66799***********************9.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDDTFPVEFW HNDLFWLDAP ISVPVPVSAP AQQQKSAFVP YLSRPNFRIE QKNNLAPAPV  60
PAASNSVNKR VIEYWRKQWH EKKEAAALGD LEREKCHRHM MNERTRRERE KQSYLGVHSL  120
LPKKTKNDKN SIVQAAARTI QELRASEEML KRRNTELEMA IAAKNRENAK GTKPIRLELA  180
NPSSGIDSML AVLNVLKTGR INPKAIHANF FNSLFSAQLA IDDTRMGGAE VERVLQATVR  240
EADRRFRRQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.14e-36bHLH family protein