PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548634.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 650aa MW: 71712.9 Da PI: 6.0231

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.0005	485	522	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_023548634.1 485 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 522 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MGTADLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP STSKFYRKTL 60 EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNISSTLEYC 120 DGWQTQFLAG IKTIVVVAVV PHGVLQLGSL DKVTEDVNVV AHIRNVFLTL QESSAGHIEP 180 MPSCKSSGYM KSEDESVSKN VGIELSGSGG NESLRTQPDA INVESFKSKA RLLDDRICGG 240 EPSGYKDMAV DLKQKCNAPS QNTAMDITND ACFPVNHNAM LSRTNPTEMY LQNDVEASED 300 GCPSNTSLKF PAGYELHEVL GPAFLKDALH LDWQTEYVFG GRASNLSEGM SSSQLTSDSP 360 MEHLLEAVVA DVCYSGSDVK SDTSLCKSGQ SLLTSERIPE PSTNVTTSAC SEGYSMGQSR 420 TSFIGEDMPN SLSSSGICGV MSPKGFSSTY SGTGSERLEK SSEPGKNSKR RARPGESCRP 480 RPRDRQLIQD RIKELRELVP NGAKCSIDSL LERTIKHMLF LQGITKHVDK LNKCANMKKE 540 NGRMGTSNTD QGSSWAVEVG GQLKVCSIIV ENLNKNGQIL VEMLCEECSH FLEIAEAIRS 600 LGLTILKGIT EAHGDKTWIC FVVEGENNRN IHRMDILWSL VQILQRSNTS

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MGTADLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP STSKFYRKTL  60
EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNISSTLEYC  120
DGWQTQFLAG IKTIVVVAVV PHGVLQLGSL DKVTEDVNVV AHIRNVFLTL QESSAGHIEP  180
MPSCKSSGYM KSEDESVSKN VGIELSGSGG NESLRTQPDA INVESFKSKA RLLDDRICGG  240
EPSGYKDMAV DLKQKCNAPS QNTAMDITND ACFPVNHNAM LSRTNPTEMY LQNDVEASED  300
GCPSNTSLKF PAGYELHEVL GPAFLKDALH LDWQTEYVFG GRASNLSEGM SSSQLTSDSP  360
MEHLLEAVVA DVCYSGSDVK SDTSLCKSGQ SLLTSERIPE PSTNVTTSAC SEGYSMGQSR  420
TSFIGEDMPN SLSSSGICGV MSPKGFSSTY SGTGSERLEK SSEPGKNSKR RARPGESCRP  480
RPRDRQLIQD RIKELRELVP NGAKCSIDSL LERTIKHMLF LQGITKHVDK LNKCANMKKE  540
NGRMGTSNTD QGSSWAVEVG GQLKVCSIIV ENLNKNGQIL VEMLCEECSH FLEIAEAIRS  600
LGLTILKGIT EAHGDKTWIC FVVEGENNRN IHRMDILWSL VQILQRSNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-101	bHLH family protein