PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548794.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 254aa    MW: 28371.7 Da    PI: 5.7065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.2e-30120178259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D + WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp+v+++tY+ eHnh 
  XP_023548794.1 120 SDSWGWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSFSDPDVFIVTYTAEHNHA 178
                     79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEDWDLQAIV KGCSGRPTSM LQDPFFSFLS EEDDFSCDFS SSSSCSSHEF EGFGSSIFPV  60
FHPLIPYPNN SAAISDLLGE FKEPQKLLQK KQISATKQKQ SKKSRQNRVV KEVKADSVCS  120
DSWGWRKYGQ KPIKGSPYPR SYYRCSSSKG CSARKQVERS FSDPDVFIVT YTAEHNHAEP  180
TRRNALAGTT RKKFPAQENP SFDVVLSPNN STCVASIEEE QPMEGVGEGG VLMHIPFEFS  240
SEDLFTGLED LLFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-30WRKY family protein