PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023548873.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 182aa    MW: 19706 Da    PI: 8.8013
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023548873.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-201665255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  XP_023548873.1 16 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDNAALRFKG 65
                    69*******.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MIIRGNVMAE TERKIHYRGV RQRPWGKWAA EIRDPKKAAR VWLGTFDTAE AAAIAYDNAA  60
LRFKGTKAKL NFPERVQANP AEFGFLPSTG GAAAAPATVA SLSSSSSSSS ISLLPPLPQE  120
EAFPGLHQYA QLLSSTDADF PYYSSTLLNQ QPHYPFSSSP SHPLPQDHDH YGKDFGAGGS  180
TN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-31ERF family protein