PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548957.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 235aa MW: 27196.9 Da PI: 7.1275

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164	5.4e-51	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk+++++ ++ e+d++++ePw+Lp+++k + kewyfFs rd+kyatg+r+nrat +gyWkatgkd++v++ XP_023548957.1 10 LPPGFRFYPSDEELVCHYLYKKITNEEALK-GTLMEIDLHTCEPWHLPEAAKLNGKEWYFFSFRDRKYATGQRANRATLEGYWKATGKDRTVMNP 103 79*********************99544.78***********8888899**********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+++g++ktLvfy++rap+g kt W+mhe+r+ XP_023548957.1 104 kTGQVIGMRKTLVFYRKRAPNGIKTGWIMHEFRI 137 78899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGLRDVGETL PPGFRFYPSD EELVCHYLYK KITNEEALKG TLMEIDLHTC EPWHLPEAAK 60 LNGKEWYFFS FRDRKYATGQ RANRATLEGY WKATGKDRTV MNPKTGQVIG MRKTLVFYRK 120 RAPNGIKTGW IMHEFRIQTP HMPPKEDWVL CRVFYKSKPD EITTGTTKIH QTFDMAAPVP 180 ISSSSYLASN VQLPSVEDGN RVSWKNINNV DEEAGGFEIE DSIQNGFFPY EYFFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	1e-88	NAC family protein