PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549145.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YB
Protein Properties Length: 156aa    MW: 17030.1 Da    PI: 4.8932
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.91.4e-5345141197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     v+eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++ alatlGf+dy+epl+ yl +yre+eg
  XP_023549145.1  45 VKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLIRYREIEG 139
                     58********************************************************************************************* PP

           NF-YB  96 ek 97 
                     e+
  XP_023549145.1 140 ER 141
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MDDNTPMPER LVEFKYDFTT GGGGGVGGST GGSSEEAGSG IGGFVKEQDR LLPIANVGRI  60
MKQILPPNAK ISKEAKETMQ ECVSEFISFV TGEASDKCHK EKRKTVNGDD ICCALATLGF  120
DDYAEPLRRY LIRYREIEGE RAQQNKGCCN NNTHDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.16e-59NF-YB family protein