PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549249.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 444aa MW: 49717.5 Da PI: 10.0363

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.9e-08	129	170	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_023549249.1 129 SWTKEETDQLFDLCERFDLR-FVVIADRFPSTRTVEELKERYY 170 7*****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MDAKDILGLP KNTLPLSQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFSNSAR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEVVKYTDEE 120 YEKFLKDPSW TKEETDQLFD LCERFDLRFV VIADRFPSTR TVEELKERYY HASKAILGAR 180 GPTSREGSGN TPAKDPFNVS QEIERKRALS MVLSQTKQKE RKDAEVLAEA KKIIESRKAE 240 RVAEESKLAV TSNAVPEVTE RAVVPGESVP SVSNVQPPPP AAVPSTVVAD NASTLASLRM 300 LPVYLRTYAL EQMVHAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKAVC AEHLELRKEI 360 LTLLNLQKQL QNKEAEGSSF RESPYSEAPG TPKDRAFIAD SMSFGGERFV KRDQKRKATG 420 RLSEAPSSPA QSNKRPRKQK GSDL

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MDAKDILGLP KNTLPLSQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK  60
RPPSDEKITW QWLPFSNSAR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS VEVVKYTDEE  120
YEKFLKDPSW TKEETDQLFD LCERFDLRFV VIADRFPSTR TVEELKERYY HASKAILGAR  180
GPTSREGSGN TPAKDPFNVS QEIERKRALS MVLSQTKQKE RKDAEVLAEA KKIIESRKAE  240
RVAEESKLAV TSNAVPEVTE RAVVPGESVP SVSNVQPPPP AAVPSTVVAD NASTLASLRM  300
LPVYLRTYAL EQMVHAASSS AGLRTIKRVE QTLQDLSVNL KPRVPTKAVC AEHLELRKEI  360
LTLLNLQKQL QNKEAEGSSF RESPYSEAPG TPKDRAFIAD SMSFGGERFV KRDQKRKATG  420
RLSEAPSSPA QSNKRPRKQK GSDL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	32	KKPRAQKDAQRKR
2	410	416	VKRDQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein