PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549326.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 356aa    MW: 38970.6 Da    PI: 7.6684
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-13118162347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_023549326.1 118 PWTEEEHRLFLVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 162
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RGGRTGSAAL ACGGGGGGGS GGVKLFGVRL TDGCFIKKSA  60
SMGNLSVHYH SSSSAAASPN PDSPNSDPVH DTDGFLSDDP THASCSANRR GERKKGVPWT  120
EEEHRLFLVG LQKLGKGDWR GISRNFVITR TPTQVASHAQ KYFIRQSNST RRKRRSSLFD  180
MVPEMASDPL PMPEDEVLHA SQAKETENSS SQPSLNLSLN SEFHTMETTV EEENGNELDA  240
TKMEVAGFPP MVPGFIPAYM PVPFRIWAPS TFPMEEEKGV EMCHHEVLRP IPVVPKEPVN  300
VDELVGLSQL TLREHEGEHR EHLPLSLRLT GEGSRQSAFH PKTPVSRSNL NKQGRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.13e-87MYB_related family protein